BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB006D07LP1|AL425526
(1030 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig770 842 0.0
3x_Contig1061 616 e-176
>3x_Contig770
Length = 2203
Score = 842 bits (424), Expect = 0.0
Identities = 424/424 (100%)
Strand = Plus / Minus
Query: 11 acttgatagaacagctgtacgaggatcagaaagggccgtttaatttttcctgttgggttt 70
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 427 acttgatagaacagctgtacgaggatcagaaagggccgtttaatttttcctgttgggttt 368
Query: 71 gattcagaacgtatagactgttttagctgtgctttctatacttcgatagctcggacaaca 130
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 367 gattcagaacgtatagactgttttagctgtgctttctatacttcgatagctcggacaaca 308
Query: 131 agcatactaggccctgaaaacagggatcccttttaagataaagaagggtatataagtata 190
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 307 agcatactaggccctgaaaacagggatcccttttaagataaagaagggtatataagtata 248
Query: 191 tcaagctgggcaagttaggacatctttattaatattaaggtaccgacttttcattcaatt 250
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 247 tcaagctgggcaagttaggacatctttattaatattaaggtaccgacttttcattcaatt 188
Query: 251 tcaaatattcaaatcaaataccgcaatacaagaaggaaatatacagtaaacgatgacgga 310
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 187 tcaaatattcaaatcaaataccgcaatacaagaaggaaatatacagtaaacgatgacgga 128
Query: 311 tggtactatagaacatgctcaggaccagtcgttaatagacgatgcctccactttgttgat 370
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 127 tggtactatagaacatgctcaggaccagtcgttaatagacgatgcctccactttgttgat 68
Query: 371 gttctctaaaacatcgaattcaaacgtcaactcgagcgatgagggtaaagacgagttaaa 430
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 67 gttctctaaaacatcgaattcaaacgtcaactcgagcgatgagggtaaagacgagttaaa 8
Query: 431 agcc 434
||||
Sbjct: 7 agcc 4
>3x_Contig1061
Length = 4663
Score = 616 bits (310), Expect = e-176
Identities = 330/335 (98%), Gaps = 3/335 (0%)
Strand = Plus / Minus
Query: 696 atggttgcggctgctgcgttacacaaagcagctacgatgccactacctcttaaacgaaaa 755
|||||||||||||||||||||| |||||||||||||||||||||||||||||||||||
Sbjct: 4663 atggttgcggctgctgcgttacc--aagcagctacgatgccactacctcttaaacgaaaa 4606
Query: 756 gcagaaaacgatagaaaacctgctgcgaaca-acagcgtgccaatgcctagatcaggtgc 814
||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||
Sbjct: 4605 gcagaaaacgatagaaaacctgctgcgaacacacagcgtgccaatgcctagatcaggtgc 4546
Query: 815 cgaggaaaaatctccttcaaagcaagcmaagagcgaagataaagtggtggaacaagaaga 874
||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||
Sbjct: 4545 cgaggaaaaatctccttcaaagcaagcaaagagcgaagataaagtggtggaacaagaaga 4486
Query: 875 tagtttcaaagaagctgtagaggaacaaaaacttgaaaaatctgaaacggataggttttc 934
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4485 tagtttcaaagaagctgtagaggaacaaaaacttgaaaaatctgaaacggataggttttc 4426
Query: 935 ttcggttcccgaatcttatgttgttgatccagatgctggtataataacgtgcatctgtgg 994
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4425 ttcggttcccgaatcttatgttgttgatccagatgctggtataataacgtgcatctgtgg 4366
Query: 995 ctatgaagatgatgatggatttactatacaatgcg 1029
|||||||||||||||||||||||||||||||||||
Sbjct: 4365 ctatgaagatgatgatggatttactatacaatgcg 4331
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.38 0.711 1.31
Gapped
Lambda K H
1.38 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 8463
Number of Sequences: 1807
Number of extensions: 8463
Number of successful extensions: 117
Number of sequences better than 1.0e-20: 2
length of query: 1030
length of database: 10,358,551
effective HSP length: 16
effective length of query: 1014
effective length of database: 10,329,639
effective search space: 10474253946
effective search space used: 10474253946
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.8 bits)
S1: 12 (24.3 bits)
S2: 50 (99.8 bits)